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batch blastx reference search  (TM Software Inc)
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TM Software Inc batch blastx reference search
In silico analysis of transcript bias in <t> contigs </t> formed from all sequences in each library, the ten highest R-values were analyzed using <t> BLASTX </t> (e-value ≤1E -10 ).
Batch Blastx Reference Search, supplied by TM Software Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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In silico analysis of transcript bias in contigs formed from all sequences in each library, the ten highest R-values were analyzed using BLASTX (e-value ≤1E -10 ).

Journal: BMC Genomics

Article Title: Comparative analysis of expressed sequence tags from three castes and two life stages of the termite Reticulitermes flavipes

doi: 10.1186/1471-2164-11-463

Figure Lengend Snippet: In silico analysis of transcript bias in contigs formed from all sequences in each library, the ten highest R-values were analyzed using BLASTX (e-value ≤1E -10 ).

Article Snippet: Both singletons and contigs were assigned putative functions using a batch BLASTX reference search from the non-redundant protein database using BlastStation (v2.61, TMSoftware, Arcadia, CA), with an e-value ≤1e -10 .

Techniques: In Silico

In silico analysis and predicted protein function of 10 contigs with the highest R-value with no putative role assigned by a BLASTX search.

Journal: BMC Genomics

Article Title: Comparative analysis of expressed sequence tags from three castes and two life stages of the termite Reticulitermes flavipes

doi: 10.1186/1471-2164-11-463

Figure Lengend Snippet: In silico analysis and predicted protein function of 10 contigs with the highest R-value with no putative role assigned by a BLASTX search.

Article Snippet: Both singletons and contigs were assigned putative functions using a batch BLASTX reference search from the non-redundant protein database using BlastStation (v2.61, TMSoftware, Arcadia, CA), with an e-value ≤1e -10 .

Techniques: In Silico, Activity Assay